modules/custom_sratoolsncbisettings

Test for the presence of suitable NCBI settings or create them on the fly.

NCBIsettingssra-toolsprefetchfasterq-dump

https://github.com/nf-core/modules/[...]/modules/nf-core/custom/sratoolsncbisettings

Description

Test for the presence of suitable NCBI settings or create them on the fly.

Input

No input parameters

Output

Name (Type)

Description

Pattern

`versions` (file)

File containing software versions

versions.yml

`ncbi_settings` (file)

An NCBI user settings file.

*.mkfg

Tools

sratools
Public Domain

SRA Toolkit and SDK from NCBI

github.com/ncbi/sra-tools github.com/ncbi/sra-tools/wiki https://github.com/ncbi/sra-tools