Description

Create deacon index for reference genome

Input

name:type
description
pattern

meta{:bash}

:map

Groovy Map containing reference information. e.g. [ id:‘test’, single_end:false ]

fasta{:bash}

:file

Input genome fasta file

*.{fasta,fasta.gz,fas,fas.gz,fa,fa.gz,fna,fna.gz}

Output

name:type
description
pattern

index{:bash}

meta{:bash}

:map

Groovy Map containing reference information. e.g. [ id:‘test’, single_end:false ]

*.idx{:bash}

:file

Deacon minimizer index file

*.idx

versions{:bash}

versions.yml{:bash}

:file

File containing software versions

versions.yml