modules/deeparg_downloaddata

A deep learning based approach to predict Antibiotic Resistance Genes (ARGs) from metagenomes

downloaddatabasedeepargantimicrobial resistance genesdeep learningprediction

https://github.com/nf-core/modules/[...]/modules/nf-core/deeparg/downloaddata

Description

A deep learning based approach to predict Antibiotic Resistance Genes (ARGs) from metagenomes

Input

No input parameters

Output

name:type

description

pattern

`db{:bash}`

`db/{:bash}`
`:directory`

Directory containing database required for deepARG.

db/

`versions{:bash}`

`versions.yml{:bash}`
`:file`

File containing software versions

versions.yml

Tools

deeparg
MIT

A deep learning based approach to predict Antibiotic Resistance Genes (ARGs) from metagenomes

github.com/gaarangoa/deeparg 10.1186/s40168-018-0401-z

modules/deeparg_downloaddata

Description

Input

Output

`db{:bash}`

`db/{:bash}`
`:directory`

`versions{:bash}`

`versions.yml{:bash}`
`:file`

Tools

deeparg
MIT

included in

maintainer

get in touch

modules/deeparg_downloaddata

Description

Input

Output

db{:bash}

db/{:bash}:directory

versions{:bash}

versions.yml{:bash}:file

Tools

deeparg MIT

included in

maintainer

get in touch

`db{:bash}`

`db/{:bash}`
`:directory`

`versions{:bash}`

`versions.yml{:bash}`
`:file`

deeparg
MIT