Description

Database download module for DeepBGC which detects BGCs in bacterial and fungal genomes using deep learning.

Input

No input parameters

Output

name:type
description
pattern

db

deepbgc_db/

:directory

Directory containing the DeepBGC database

deepbgc_db/

versions_deepbgc

${task.process}

:string

The name of the process

deepbgc

:string

The name of the tool

deepbgc info 2>&1 | sed '6!d;s/.*= version //;s/ .*//'

:eval

The expression to obtain the version of the tool

Topics

name:type
description
pattern

versions

${task.process}

:string

The name of the process

deepbgc

:string

The name of the tool

deepbgc info 2>&1 | sed '6!d;s/.*= version //;s/ .*//'

:eval

The expression to obtain the version of the tool

Tools

deepbgc
MIT

DeepBGC - Biosynthetic Gene Cluster detection and classification

github.com/Merck/deepbgc 10.1093/nar/gkz654
included in
funcscan
maintainer
Github user louperelo
get in touch
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