Deepcell/mesmer segmentation for whole-cell
meta
Groovy Map containing sample information e.g. [ id:‘test’, single_end
img
Multichannel image file
*.{tiff,tif,h5,hdf5}
meta2
membrane_img
Optional membrane image to be provided separately.
mask
File containing the mask.
*.{tif, tiff}
versions
File containing software versions
versions.yml
Deep cell is a collection of tools to segment imaging data
