Computes read coverage for genomic regions (bins) across the entire genome.
meta
Groovy Map containing sample information e.g. [ id:‘test’, single_end
bam
One or more BAM files
*.{bam}
bais
Corresponding BAM file indexes
*.bam.bai
labels
User specified labels instead of default labels (file names).
matrix
compressed numpy array of read coverage data used by plotCorrelation and plotPCA deeptool utilities
all_bam.bamSummary.npz
versions
File containing software versions
versions.yml
A set of user-friendly tools for normalization and visualization of deep-sequencing data
