plots cumulative reads coverages by BAM file
meta{:bash}
:map
Groovy Map containing sample information e.g. [ id:‘test’ ]
bams{:bash}
:file
BAM files
*.bam
bais{:bash}
Corresponding BAM file indexes
*.bam.bai
pdf{:bash}
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
*.pdf{:bash}
Output figure containing resulting plot
*.{plotFingerprint.pdf}
matrix{:bash}
*.raw.txt{:bash}
Output file summarizing the read counts per bin
*.{plotFingerprint.raw.txt}
metrics{:bash}
*.qcmetrics.txt{:bash}
file containing BAM file quality metrics
*.{qcmetrics.txt}
versions{:bash}
versions.yml{:bash}
File containing software versions
versions.yml
A set of user-friendly tools for normalization and visualization of deep-sequencing data
