plots cumulative reads coverages by BAM file
meta:map
Groovy Map containing sample information e.g. [ id:‘test’ ]
bams:file
BAM files
*.bam
bais:file
Corresponding BAM file indexes
*.bam.bai
pdf
Groovy Map containing sample information e.g. [ id:‘test’, single_end
*.pdf:file
Output figure containing resulting plot
*.{plotFingerprint.pdf}
matrix
*.raw.txt:file
Output file summarizing the read counts per bin
*.{plotFingerprint.raw.txt}
metrics
*.qcmetrics.txt:file
file containing BAM file quality metrics
*.{qcmetrics.txt}
versions
versions.yml:file
File containing software versions
versions.yml
A set of user-friendly tools for normalization and visualization of deep-sequencing data
