plots values produced by deeptools_computematrix as a profile plot
meta
:map
Groovy Map containing sample information e.g. [ id:‘test’ ]
matrix
:file
gzipped matrix file produced by deeptools_ computematrix deeptools utility
*.{mat.gz}
pdf
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
*.pdf
Output figure containing resulting plot
*.{plotProfile.pdf}
table
*.tab
Output table
versions_deeptools
${task.process}
:string
The name of the process
deeptools
The name of the tool
plotProfile --version | sed "s/plotProfile //g"
:eval
The expression to obtain the version of the tool
versions
A set of user-friendly tools for normalization and visualization of deep-sequencing data
