Description

Create DRAGEN hashtable for reference genome

Input

name:type
description
pattern

meta{:bash}

:map

Groovy Map containing reference information e.g. [ id:‘test’, single_end:false ]

fasta{:bash}

:file

Input genome fasta file

Output

name:type
description
pattern

hashmap{:bash}

meta{:bash}

:map

Groovy Map containing reference information e.g. [ id:‘test’, single_end:false ]

dragmap{:bash}

:string

DRAGMAP hash table

*.{cmp,.bin,.txt}

versions_dragmap{:bash}

${task.process}{:bash}

:string

The name of the process

dragmap{:bash}

:string

DRAGMAP hash table

*.{cmp,.bin,.txt}

dragen-os --version 2>&1{:bash}

:eval

The expression to obtain the version of the tool

Topics

name:type
description
pattern

versions{:bash}

${task.process}{:bash}

:string

The name of the process

dragmap{:bash}

:string

DRAGMAP hash table

*.{cmp,.bin,.txt}

dragen-os --version 2>&1{:bash}

:eval

The expression to obtain the version of the tool

Tools

dragmap
GPL v3

Dragmap is the Dragen mapper/aligner Open Source Software.