Convert any PEP project or Nextflow samplesheet to any format
Input
Name (Type)
Description
Pattern
samplesheet (file)
Nextflow samplesheet or PEP project
*.{yaml,yml,csv}
format (string)
Extension of an output file
pep_input_base_dir (file)
Optional path to the directory where files specified in a PEP config file are stored. Any paths specified in the config will need to be relative to this base directory.