the revseq program from emboss reverse complements a nucleotide sequence
meta{:bash}
:map
Groovy Map containing sample information e.g. [ id:'test', single_end:false ]
[ id:'test', single_end:false ]
sequences{:bash}
:file
Input sequences
*.{fasta,fna,fa,fst,aln,phy}
revseq{:bash}
*.${sequences.name - ~/.*\./}{:bash}
File with reverse complemented sequences
versions_emboss{:bash}
${task.process}{:bash}
:string
The name of the process
emboss{:bash}
The name of the tool
revseq -version 2>&1 | sed 's/EMBOSS://'{:bash}
:eval
The expression to obtain the version of the tool
versions{:bash}
The European Molecular Biology Open Software Suite
