estimation of the unfolded site frequency spectrum
meta
Groovy Map containing sample information e.g. [ id:'test']
[ id:'test']
e_config
config file for est-sfs
*.txt
data
input data file for est-sfs
seed
text file containing random number seed
versions
File containing software versions
versions.yml
sfs_out
output file consists of the comma-separated estimated uSFS vector
pvalues_out
this file contains the estimated ancestral state probabilities for each site
est-sfs ( Keightley and Jackson, 2018) is a stand-alone implementation of a method to infer the unfolded site frequency spectrum (the uSFS) and ancestral state probabilities by maximum likelihood (ML).
