Description

A fast K-mer counter for high-fidelity shotgun datasets

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

histogram:file

A FastK histogram file

*.hist

Output

name:type
description
pattern

hist

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

*.hist:file

A formatted histogram file

*.hist

versions

versions.yml:file

File containing software versions

versions.yml

Tools

fastk

A fast K-mer counter for high-fidelity shotgun datasets