Description

A tool to merge FastK histograms

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

hist:file

FastK histogram file

ktab:file

FastK ktab file

prof:file

FastK prof file

Output

name:type
description
pattern

hist

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

*.hist:file

FastK histogram file

*.hist

ktab

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

*.ktab*", hidden: true:file

FastK ktab file

*.ktab

prof

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

*.{prof,pidx}*", hidden: true:file

FastK prof file

*.{prof,pidx}

versions

versions.yml:file

File containing software versions

versions.yml

Tools

fastk

A fast K-mer counter for high-fidelity shotgun datasets