Description

A command line tool that makes it easier to find sequencing data from the SRA / GEO / ENA.

Input

Name (Type)
Description
Pattern

ids (list)

List of supported database ids e.g. SRA / GEO / ENA

Output

Name (Type)
Description
Pattern

versions (file)

File containing software versions

versions.yml

json (file)

JSON file containing metadata for ids

*.{json}
author
Github user drpatelh
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Tools

ffq
MIT

A command line tool that makes it easier to find sequencing data from the SRA / GEO / ENA.

github.com/pachterlab/ffq github.com/pachterlab/ffq#usage https://github.com/pachterlab/ffq10.1101/2022.05.18.492548