Description

Decompression tool for foldcomp compressed structures

Input

name:type
description
pattern

meta

:map

Groovy Map containing sample information e.g. [ id:'test' ]

fcz

:file

Foldcomp compressed protein structure(s) (also works with folder input)

*{*,*.fcz}

Output

name:type
description
pattern

pdb

meta

:map

Groovy Map containing sample information e.g. [ id:'test' ]

{*pdb,*.cif}

:file

Either single protein structure (if input was file) or folder with all decompressed protein structures (if input was directory)

{*_pdb,*.pdb,*.cif}

versions_foldcomp

${task.process}

:string

The name of the process

foldcomp

:string

The name of the tool

foldcomp --version | cut -d' ' -f2

:eval

The expression to obtain the version of the tool

Topics

name:type
description
pattern

versions

${task.process}

:string

The name of the process

foldcomp

:string

The name of the tool

foldcomp --version | cut -d' ' -f2

:eval

The expression to obtain the version of the tool

Tools

foldcomp
GPL v3-or-later

Foldcomp: a library and format for compressing and indexing large protein structure sets