Description

Decompression tool for foldcomp compressed structures

Input

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:'test' ]

fcz (file)

Foldcomp compressed protein structure(s) (also works with folder input)

*{*,*.fcz}

Output

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:'test' ]

pdb (file)

Either single protein structure (if input was file) or folder with all decompressed protein structures (if input was directory)

{*_pdb,*.pdb,*.cif}

versions (file)

File containing software versions

versions.yml
maintainer
Github user vagkaratzas
get in touch
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Tools

foldcomp
GPL v3-or-later

Foldcomp: a library and format for compressing and indexing large protein structure sets

github.com/steineggerlab/foldcomp 10.1093/bioinformatics/btad153