Create a database from protein structures
meta:map
Groovy Map containing sample information e.g. [ id:'test', single_end:false ]
[ id:'test', single_end:false ]
pdb:file
Protein structure(s) in PDB, mmCIF or mmJSON format (also works with folder input)
*.{pdb,mmcif,mmjson}
db
${meta.id}:directory
Directory containing pdb database files
*
versions
versions.yml:file
File containing software versions
versions.yml
Foldseek: fast and accurate protein structure search
