Description

fq lint is a FASTQ file pair validator.

Input

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

fastq (file)

FASTQ file list

*.fastq{,.gz}

Output

Name (Type)
Description
Pattern

versions (file)

File containing software versions

versions.yml

Tools

fq
MIT

fq is a library to generate and validate FASTQ file pairs.