fq lint is a FASTQ file pair validator.
meta{:bash}
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
fastq{:bash}
:file
FASTQ file list
*.fastq{,.gz}
lint{:bash}
Lint output
*.fq_lint.txt
*.fq_lint.txt{:bash}
versions_fq{:bash}
${task.process}{:bash}
:string
The name of the process
fq{:bash}
The name of the tool
fq lint --version | sed 's/fq-lint //; s/ .*//'{:bash}
:eval
The expression to obtain the version of the tool
versions{:bash}
fq is a library to generate and validate FASTQ file pairs.
