Demultiplex fastq files
meta
Groovy Map containing sample information e.g. [ id:‘test’, single_end
sample_sheet
Tsv file, with two columns sample_id and barcode
*.{tsv}
fastq_readstructure_pairs
List of lists i.e. [[, , ],…]
versions
File containing software versions
versions.yml
sample_fastq
Demultiplexed per-sample FASTQ files
output/*R*.fastq.gz
metrics
Demultiplexing summary stats; sample_id, barcode templates, frac_templates, ratio_to_mean, ratio_to_best
output/demux-metrics.txt
most_frequent_unmatched
File containing unmatched fastq records
output/unmatched*.fq.gz
A toolkit for working with FASTQ files, written in Rust.
