Gene Allele Mutation Microbial Assessment
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
fasta:file
FASTA file
*.{fa,fasta}
db:file
Database in FASTA format
gamma
*.gamma:file
GAMMA file with annotated gene matches
*.{gamma}
psl
*.psl:file
PSL file with all gene matches found
*.{psl}
gff
*.gff:file
GFF file
*.{gff}
fasta
*.fasta:file
multifasta file of the gene matches
*.{fasta}
versions
versions.yml:file
File containing software versions
versions.yml
Tool for Gene Allele Mutation Microbial Assessment
