Generate a ganon report file from the output of ganon classify
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
rep:file
Input ‘repo’ files from ganon classify
*.rep
db:file
Ganon database files from build or build-custom
*.{ibf,tax}
tre
*.tre:file
Output ganon report containing taxonomic profile information. Formatting of contents depends on —output-format.
*.tre
versions
versions.yml:file
File containing software versions
versions.yml
ganon classifies short DNA sequences against large sets of genomic reference sequences efficiently
