Generate a multi-sample report file from the output of ganon report runs
meta
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
tre
:file
A list of ‘tre’ files from ganon report
*.tre
txt
*.txt
Output ganon table containing taxonomic profile information of multiple samples. Formatting of contents depends on –output-format.
versions_ganon
${task.process}
:string
The name of the process
ganon
The name of the tool
ganon --version 2>1 | sed 's/.*ganon //g'
:eval
The expression to obtain the version of the tool
versions
ganon classifies short DNA sequences against large sets of genomic reference sequences efficiently
