Merges adjacent DepthEvidence records
meta{:bash}
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
depth_evidence{:bash}
:file
The depth evidence file
*.rd.txt.gz
depth_evidence_index{:bash}
The index of the depth evidence file
*.rd.txt.gz.tbi
fasta{:bash}
Reference FASTA file needed when the input is a CRAM file
*.{fasta,fa}
fasta_fai{:bash}
Index of the reference FASTA file needed when the input is a CRAM file
*.fai
dict{:bash}
Sequence dictionary of the reference FASTA file needed when the input is a CRAM file
*.dict
condensed_evidence{:bash}
*.rd.txt.gz{:bash}
The condensed depth evidence
condensed_evidence_index{:bash}
*.rd.txt.gz.tbi{:bash}
versions{:bash}
versions.yml{:bash}
File containing software versions
versions.yml
Genome Analysis Toolkit (GATK4)
