Description

Converts an Picard IntervalList file to a BED file.

Input

name:type
description
pattern

meta{:bash}

:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

intervals{:bash}

:file

IntervalList file

Output

name:type
description
pattern

bed{:bash}

meta{:bash}

:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

${prefix}.bed{:bash}

:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

${prefix}.bed

versions{:bash}

versions.yml{:bash}

:file

File containing software versions

versions.yml