Description

Splits the interval list file into unique, equally-sized interval files and place it under a directory

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

intervals:file

Interval file

Output

name:type
description
pattern

interval_list

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

*_split/*/*.interval_list:file

Interval list files

*.interval_list

_list:file

Interval list files

*.interval_list

versions

versions.yml:file

File containing software versions

versions.yml

Tools

gatk4
Apache-2.0

Developed in the Data Sciences Platform at the Broad Institute, the toolkit offers a wide variety of tools with a primary focus on variant discovery and genotyping. Its powerful processing engine and high-performance computing features make it capable of taking on projects of any size.