Description

Split intervals into sub-interval files.

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:‘test’ ]

intervals:file

Interval file

meta2:map

Groovy Map containing reference information e.g. [ id:‘genome’ ]

fasta:file

Reference FASTA

*.{fa,fasta}

meta3:map

Groovy Map containing reference information e.g. [ id:‘genome’ ]

fai:file

Reference FASTA index

*.fai

meta4:map

Groovy Map containing reference information e.g. [ id:‘genome’ ]

dict:file

Reference sequence dictionary

*.dict

Output

name:type
description
pattern

split_intervals

meta:map

Groovy Map containing sample information e.g. [ id:‘test’ ]

**.interval_list:file

interval files

*.interval_list

versions

versions.yml:file

File containing software versions

versions.yml