Convert a mappability file to bedgraph format
meta
Groovy Map containing sample information e.g. [ id:‘test’, single_end
map
The mappability file created from the index
*.mappability
meta2
Groovy Map containing index information
index
The index of the reference FASTA
*.gem
versions
File containing software versions
versions.yml
bedgraph
The resulting bedgraph file
*.bg
sizes
The chromosome sizes
*.sizes
GEM2 is a high-performance mapping tool. It also provide a unique tool to evaluate mappability.
