Create a GEM index from a FASTA file
meta:map
Groovy Map containing information about the fasta file e.g. [ id:‘test’ ]
fasta:file
A reference FASTA file to index
*.{fasta,fa,fna}
index
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
*.gem:file
The GEM index file
*.gem
info
*.info:file
The execution log
*.info
versions
versions.yml:file
File containing software versions
versions.yml
The GEM indexer (v3).
