create mappability files for a genome
meta
Groovy Map containing sample information e.g. [ id:‘test’, single_end
index
index directory
meta2
Groovy Map containing regions information e.g. [ id:‘test’, single_end
regions
optional - a bed file with regions to define the mappability off
*.bed
versions
File containing software versions
versions.yml
wig
genmap wig mappability file
*.wig
bedgraph
genmap bedgraph mappability file
*.bedgraph
txt
genmap text mappability file
*.txt
csv
genmap csv mappability file
*.csv
Ultra-fast computation of genome mappability.