Collapse walk-preserving shared affixes in variation graphs in GFA format
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
gfa:file
Variation graph in GFA format
*.{gfa}
gfa
*.gfa:file
Non-redundant variation graph in GFA 1.0 format
affixes
*.txt:file
Shared affixes in tab-separated values (TSV) text format
*.{txt}
versions
versions.yml:file
File containing software versions
versions.yml
GFAffix identifies walk-preserving shared affixes in variation graphs and collapses them into a non-redundant graph structure.
