Collapse walk-preserving shared affixes in variation graphs in GFA format
meta
Groovy Map containing sample information e.g. [ id:‘test’, single_end
gfa
Variation graph in GFA format
*.{gfa}
Non-redundant variation graph in GFA 1.0 format
affixes
Shared affixes in tab-separated values (TSV) text format
*.{txt}
versions
File containing software versions
versions.yml
GFAffix identifies walk-preserving shared affixes in variation graphs and collapses them into a non-redundant graph structure.