Description

Converts GFA or rGFA files to FASTA

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:'test', single_end:false ]

gfa:file

GFA or rGFA file

*.gfa

Output

name:type
description
pattern

fasta

meta:map

Groovy Map containing sample information e.g. [ id:'test', single_end:false ]

*.fasta.gz:file

FASTA file

*.fasta

versions

versions.yml:file

File containing software versions

versions.yml

Tools

gfatools
Unknown

Tools for manipulating sequence graphs in the GFA and rGFA formats

github.com/lh3/gfatools no DOI available
maintainer
Github user mahesh-panchal
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