Generates haplotype calls by sampling haplotype estimates
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
input:file
VCF/BCF file generated using GLIMPSE ligate
*.{vcf,bcf,vcf.gz,bcf.gz}
haplo_sampled
*.{vcf,bcf,vcf.gz,bcf.gz}:file
Output VCF/BCF file containing phased genotypes.
versions
versions.yml:file
File containing software versions
versions.yml
GLIMPSE is a phasing and imputation method for large-scale low-coverage sequencing studies.
