Description

Split a file into consecutive or interleaved sections

Input

name:type
description
pattern

meta{:bash}

:map

Groovy Map containing sample information e.g. [ id:'sample1', single_end:false ]

input{:bash}

:file

Text file, possibly gzip file

Output

name:type
description
pattern

split{:bash}

meta{:bash}

:map

Groovy Map containing sample information e.g. [ id:'sample1', single_end:false ]

${prefix}.*{:bash}

:file

Split files

${prefix}.*

versions_coreutils{:bash}

${task.process}{:bash}

:string

The process the versions were collected from

coreutils{:bash}

:string

The tool name

sort --version |& sed '1!d ; s/sort (GNU coreutils) //'{:bash}

:string

The command used to generate the version of the tool

Topics

name:type
description
pattern

versions{:bash}

${task.process}{:bash}

:string

The process the versions were collected from

coreutils{:bash}

:string

The tool name

sort --version |& sed '1!d ; s/sort (GNU coreutils) //'{:bash}

:string

The command used to generate the version of the tool

Tools

gnu
GPL

The GNU Core Utilities are the basic file, shell and text manipulation utilities of the GNU operating system. These are the core utilities which are expected to exist on every operating system.