A versatile pairwise aligner for genomic and spliced nucleotide sequences
meta
Groovy Map containing sample information e.g. [ id:‘test’, single_end
fastq
List of input FASTQ files and paired-end data, respectively.
fasta
Reference database in FASTA format.
index
FASTA index in gmidx.
sam
Alignment in SAM format
*.sam
versions
File containing software versions
versions.yml
A versatile pairwise aligner for genomic and spliced nucleotide sequences.
