Description

GenomeTools gt-gff3 utility to parse, possibly transform, and output GFF3 files

Input

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:'test' ]

gff3 (file)

Input gff3 file

*.{gff,gff3}

Output

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:'test' ]

gt_gff3 (file)

Parsed gff3 file produced only if there is no parsing error

*.gt.gff3

error_log (file)

Error log if gt-gff3 failed to parse the input gff3 file

*.error.log

versions (file)

File containing software versions

versions.yml