Description

GenomeTools gt-stat utility to show statistics about features contained in GFF3 files

Input

name:type
description
pattern

meta{:bash}

:map

Groovy Map containing sample information e.g. [ id:'test' ]

gff3{:bash}

:file

Input gff3 file

*.{gff,gff3}

Output

name:type
description
pattern

stats{:bash}

meta{:bash}

:map

Groovy Map containing sample information e.g. [ id:'test' ]

${prefix}.yml{:bash}

:file

Stats file in yaml format

*.yml

versions{:bash}

versions.yml{:bash}

:file

File containing software versions

versions.yml