Computes enhanced suffix array using GenomeTools gt-suffixerator utility
meta
:map
Groovy Map containing sample information e.g. [ id:'sample1' ]
[ id:'sample1' ]
fasta
:file
Input fasta file to index
*.{fsa,fa,fasta}
mode
:string
Mode must be one of ‘dna’, or ‘protein’
index
$prefix
:directory
Folder containing the suffixerator index files
suffixerator
versions_gt
${task.process}
The name of the process
genometools
The name of the tool
gt --version | sed '1!d;s/.* //'
:eval
The expression to obtain the version of the tool
versions
The GenomeTools genome analysis system
