Description

Computes enhanced suffix array using GenomeTools gt-suffixerator utility

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:'sample1' ]

fasta:file

Input fasta file to index

*.{fsa,fa,fasta}

mode:string

Mode must be one of ‘dna’, or ‘protein’

Output

name:type
description
pattern

index

meta:map

Groovy Map containing sample information e.g. [ id:'sample1' ]

$prefix:directory

Folder containing the suffixerator index files

suffixerator

versions

versions.yml:file

File containing software versions

versions.yml