Description

Computes enhanced suffix array using GenomeTools gt-suffixerator utility

Input

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:'sample1' ]

fasta (file)

Input fasta file to index

*.{fsa,fa,fasta}

mode (string)

Mode must be one of ‘dna’, or ‘protein’

Output

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:'sample1' ]

index (directory)

Folder containing the suffixerator index files

suffixerator

versions (file)

File containing software versions

versions.yml