Description

Sort GTF files in chr/pos/feature order

Input

name:type
description
pattern

gtf{:bash}

:file

Unsorted GTF/GFF file.

*.gtf

Output

name:type
description
pattern

gtf{:bash}

*.sorted.gtf{:bash}

:file

Sorted GTF file

*.gtf

versions{:bash}

versions.yml{:bash}

:file

File containing software versions

versions.yml

Tools

gtfsort
MIT

A chr/pos/feature GTF sorter that uses a lexicographically-based index ordering algorithm.