Description

Download database for GUNC detection of Chimerism and Contamination in Prokaryotic Genomes

Input

name:type
description
pattern

db_name:string

Which database to download. Options: progenomes or gtdb

progenomes|gtdb

Output

name:type
description
pattern

db

*.dmnd:file

GUNC database file

*.dmnd

versions

versions.yml:file

File containing software versions

versions.yml

Tools

gunc
GNU General Public v3 or later (GPL v3+)

Python package for detection of chimerism and contamination in prokaryotic genomes.

grp-bork.embl-community.io/gunc https://github.com/grp-bork/gunc 10.1186/s13059-021-02393-0
mag
Github user jfy133
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