Description

Download database for GUNC detection of Chimerism and Contamination in Prokaryotic Genomes

Input

Name (Type)
Description
Pattern

db_name (string)

Which database to download. Options: progenomes or gtdb

progenomes|gtdb

Output

Name (Type)
Description
Pattern

versions (file)

File containing software versions

versions.yml

db (file)

GUNC database file

*.dmnd
included in
mag
maintainer
Github user jfy133
get in touch
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Tools

gunc
GNU General Public v3 or later (GPL v3+)

Python package for detection of chimerism and contamination in prokaryotic genomes.

grp-bork.embl-community.io/gunc https://github.com/grp-bork/gunc 10.1186/s13059-021-02393-0