modules/haplocheck
Haplocheck detects contamination patterns in mtDNA AND WGS sequencing studies by analyzing
the mitochondrial DNA. Haplocheck also works as a proxy tool for nDNA studies and provides
users a graphical report to investigate the contamination further. Internally, it uses the
Haplogrep tool, that supports rCRS and RSRS mitochondrial versions.
mitochondrialmtDNAcontamination
Description
Haplocheck detects contamination patterns in mtDNA AND WGS sequencing studies by analyzing
the mitochondrial DNA. Haplocheck also works as a proxy tool for nDNA studies and provides
users a graphical report to investigate the contamination further. Internally, it uses the
Haplogrep tool, that supports rCRS and RSRS mitochondrial versions.