classification into haplogroups
meta{:bash}
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
inputfile{:bash}
:file
valid options are hsd, vcf, or fasta files
*.{vcf,vcf.gz,fasta,hsd}
format{:bash}
:string
either “vcf”, “fasta” or “hsd”
txt{:bash}
*.txt{:bash}
text file with classification information
*.{txt}
versions{:bash}
versions.yml{:bash}
File containing software versions
versions.yml
A tool for mtDNA haplogroup classification.
