Computes PCA eigenvectors for a Hi-C matrix.
meta{:bash}
:map
Groovy Map containing sample information e.g. [ id:‘test’, bin:50000 ]
matrix{:bash}
:file
HiCExplorer matrix in h5 format
results{:bash}
${prefix}_*{:bash}
Outputs of hicPCA
pca1{:bash}
${prefix}_pca1.$format{:bash}
PCA1 file
pca2{:bash}
${prefix}_pca2.$format{:bash}
PCA2 file
versions{:bash}
versions.yml{:bash}
File containing software versions
versions.yml
Set of programs to process, analyze and visualize Hi-C and capture Hi-C data