Extracts splicing sites from a gtf files
meta
Groovy Map containing reference information e.g. [ id:‘genome’ ]
gtf
Reference gtf annotation file
*.{gtf}
versions
File containing software versions
versions.yml
splicesites
Splices sites in gtf file
*.{splice_sites.txt}
HISAT2 is a fast and sensitive alignment program for mapping next-generation sequencing reads (both DNA and RNA) to a population of human genomes as well as to a single reference genome.