extract hmm from hmm database file or create index for hmm database
meta
Groovy Map containing sample information e.g. [ id:‘test’, single_end
hmm
HMM file with multiple HMM models
*.hmm
key
Name of HMM to extract. Specify either this or keyfile. If none is specified, an index will be built.
keyfile
File containing list of HMM models to extract. Specify either this or key. If none is specified, an index will be built.
*.txt
versions
File containing software versions
versions.yml
File with one or more HMM models
selection.hmm
index
Index for HMM database. Created if neither key nor keyfile is specified.
*.ssi
Biosequence analysis using profile hidden Markov models
