Description

Human mitochondrial variants annotation using HmtVar. Contains .plk file with annotation, so can be run offline

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information

vcf:file

vcf file

*.vcf

Output

name:type
description
pattern

vcf

meta:map

Groovy Map containing sample information

*_annotated.vcf:file

annotated vcf

*_annotated.vcf

versions

versions.yml:file

File containing software versions

versions.yml

Tools

hmtnote
MIT

Human mitochondrial variants annotation using HmtVar.

github.com/robertopreste/HmtNote hmtnote.readthedocs.io/en/latest/usage 10.1101/600619
included in
raredisease
maintainer
Github user sysbiocoder
get in touch
Ask a question on Slack Open an issue on GitHub