Annotate peaks with HOMER suite
meta
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
peak
:file
Peak file to annotate
fasta
Fasta file of reference genome
*.fasta
gtf
GTF file of reference genome
*.gtf
txt
*annotatePeaks.txt
Annotated peaks in txt file
stats
*annStats.txt
Annotation statistics in txt file
versions
versions.yml
File containing software versions
HOMER (Hypergeometric Optimization of Motif EnRichment) is a suite of tools for Motif Discovery and next-gen sequencing analysis.
