Annotate peaks with HOMER suite
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
peak:file
Peak file to annotate
fasta:file
Fasta file of reference genome
*.fasta
gtf:file
GTF file of reference genome
*.gtf
txt
*annotatePeaks.txt:file
Annotated peaks in txt file
*annotatePeaks.txt
stats
*annStats.txt:file
Annotation statistics in txt file
*annStats.txt
versions
versions.yml:file
File containing software versions
versions.yml
HOMER (Hypergeometric Optimization of Motif EnRichment) is a suite of tools for Motif Discovery and next-gen sequencing analysis.
