Description

Create a UCSC bed graph with the HOMER suite

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

tagDir:directory

The ‘Tag Directory’

tagDir

Output

name:type
description
pattern

bedGraph

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

*.bedGraph.gz:file

The UCSC bed graph

*.bedGraph.gz

versions

versions.yml:file

File containing software versions

versions.yml

Tools

homer
GPL-3.0-or-later

HOMER (Hypergeometric Optimization of Motif EnRichment) is a suite of tools for Motif Discovery and next-gen sequencing analysis.