Create a UCSC bed graph with the HOMER suite
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
tagDir:directory
The ‘Tag Directory’
tagDir
bedGraph
*.bedGraph.gz:file
The UCSC bed graph
*.bedGraph.gz
versions
versions.yml:file
File containing software versions
versions.yml
HOMER (Hypergeometric Optimization of Motif EnRichment) is a suite of tools for Motif Discovery and next-gen sequencing analysis.